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Divide and Conquer ad initio semiclassical molecular dynamics for spectropic calculations of complex systems (SEMICOMPLEX)

Project
Given the continuing revolution in ¿nano¿ and ¿bio¿ technologies, it is urgent for chemists to be able to carry out reliable quantum dynamics simulations of complex molecular systems. The goal of this project is to fill the gap between theory and experiment and provide the community with a user-friendly computational tool for nuclear spectra (IR, vibro-electronic, etc.) calculations of very complex systems. Present theoretical methodologies are hampered either by artificial nuclear potential interactions or by local potential perturbation assumptions. The semiclassical molecular dynamics method that I have been pioneering is not affected by these limitations because it is based on ab initio classical trajectories. The nuclear forces can be calculated by any electronic structure software and trajectories can explore the entire potential surface. The remaining challenge is to overcome the exponential scaling of computational power. I will adopt a divide-and-conquer strategy to beat the curse of dimensionality. Firstly, the ab initio classical molecular dynamics is performed for the entire complex system. Then, partial spectra are calculated by using the semiclassical information derived by the projection of the trajectories onto lower dimensional spaces. Vibrational modes are not artificially decoupled. Finally, the entire spectrum is reconstructed piece by piece. This method allows chemists to have a more reliable spectral interpretation in a wider context up to the nanoscale. With the help of my own previous experience and my collaborations, I will simulate pollutant photodegradation for environmental remediation and the vibro-electronic spectra of carcinogenic molecules adsorbed on TiO2. I will also reproduce the spectroscopic properties of molecular nano-texturing of titania films for outdoor cultural heritage preservation. A new generation of semiclassical fellows will be educated to put Europe on the leading edge of quantum simulations for spectroscopy.
  • Overview
  • Publications

Overview

Contributors

CEOTTO MICHELE   Scientific Manager  

Departments involved

Dipartimento di Chimica   Principale  

Type

H2020_ERC - Horizon 2020_Europern Research Council

Funder

EUROPEAN COMMISSION
External Organization Funding Organization

Date/time interval

November 1, 2015 - April 30, 2022

Project duration

79 months

Publications

Outputs (34)

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  • Academic Article
  • Chapter
Quantumness of classical-trajectory-based methods for vibrational spectroscopy 
JOURNAL OF CHEMICAL PHYSICS ONLINE
AIP PUBLISHING
2025
Academic Article
Partially Open Access
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A Perspective on the Investigation of Spectroscopy and Kinetics of Complex Molecular Systems with Semiclassical Approaches 
THE JOURNAL OF PHYSICAL CHEMISTRY LETTERS
2024
Academic Article
Partially Open Access
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The fate of the formic acid proton on the anatase TiO2(101) surface 
ANGEWANDTE CHEMIE. INTERNATIONAL EDITION
WILEY
2024
Academic Article
Open Access
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Elucidating NO x surface chemistry at the anatase (101) surface in TiO2 nanoparticles 
JOURNAL OF PHYSICAL CHEMISTRY. C
AMERICAN CHEMICAL SOCIETY
2023
Academic Article
Open Access
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Molecular Dynamics of Artificially Pair-Decoupled Systems: An Accurate Tool for Investigating the Importance of Intramolecular Couplings 
JOURNAL OF CHEMICAL THEORY AND COMPUTATION
AMERICAN CHEMICAL SOCIETY
2023
Academic Article
Open Access
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Vibrational spectroscopy simulation of solvation effects on a G-quadruplex 
JOURNAL OF BIOMOLECULAR STRUCTURE AND DYNAMICS
TAYLOR AND FRANCIS LTD.
2023
Academic Article
Partially Open Access
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Heavy Atom Tunneling in Organic Reactions at Coupled Cluster Potential Accuracy with a Parallel Implementation of Anharmonic Constant Calculations and Semiclassical Transition State Theory 
JOURNAL OF CHEMICAL THEORY AND COMPUTATION
AMERICAN CHEMICAL SOCIETY
2022
Academic Article
Open Access
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Quantum Anharmonic Calculations of Vibrational Spectra for Water Adsorbed on Titania Anatase(101) Surface: Dissociative versus Molecular Adsorption 
JOURNAL OF PHYSICAL CHEMISTRY. C
AMERICAN CHEMICAL SOCIETY (ACS)
2022
Academic Article
Open Access
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Quantum Vibrational Spectroscopy of Explicitly Solvated Thymidine in Semiclassical Approximation 
THE JOURNAL OF PHYSICAL CHEMISTRY LETTERS
AMERICAN CHEMICAL SOCIETY
2022
Academic Article
Open Access
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Zwitter Ionization of Glycine at Outer Space Conditions due to Microhydration by Six Water Molecules 
PHYSICAL REVIEW LETTERS
2022
Academic Article
Partially Open Access
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How many water molecules are needed to solvate one? 
CHEMICAL SCIENCE
ROYAL SOCIETY OF CHEMISTRY
2021
Academic Article
Open Access
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Qual è la più piccola goccia d'acqua? 
RENDICONTI. CLASSE DI SCIENZE MATEMATICHE E NATURALI
2021
Academic Article
Open Access
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Thermal and Nuclear Quantum Effects at the Antiferroelectric to Paraelectric Phase Transition in {KOH} and {KOD} Crystals 
JOURNAL OF PHYSICAL CHEMISTRY. C
AMERICAN CHEMICAL SOCIETY (ACS)
2021
Academic Article
Reserved Access
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Anharmonic calculations of vibrational spectra for molecular adsorbates: A divide-and-conquer semiclassical molecular dynamics approach 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2020
Academic Article
Partially Open Access
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Anharmonic quantum nuclear densities from full dimensional vibrational eigenfunctions with application to protonated glycine 
NATURE COMMUNICATIONS
NATURE RESEARCH
2020
Academic Article
Open Access
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Machine learning for vibrational spectroscopy via divide-and-conquer semiclassical initial value representation molecular dynamics with application to N-methylacetamide 
JOURNAL OF CHEMICAL PHYSICS ONLINE
AMERICAN INSTITUTE OF PHYSIC
2020
Academic Article
Partially Open Access
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Representing molecular ground and excited vibrational eigenstates with nuclear densities obtained from semiclassical initial value representation molecular dynamics 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2020
Academic Article
Open Access
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Semiclassical Vibrational Spectroscopy of Biological Molecules Using Force Fields 
JOURNAL OF CHEMICAL THEORY AND COMPUTATION
AMERICAN CHEMICAL SOCIETY
2020
Academic Article
Partially Open Access
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An effective semiclassical approach to IR spectroscopy 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2019
Academic Article
Open Access
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Reduced rovibrational coupling Cartesian dynamics for semiclassical calculations: Application to the spectrum of the Zundel cation 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2019
Academic Article
Open Access
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Semiclassical vibrational spectroscopy with Hessian databases 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2019
Academic Article
Open Access
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Vibrational investigation of nucleobases by means of divide and conquer semiclassical dynamics 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2019
Academic Article
Open Access
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"Divide and conquer" semiclassical molecular dynamics : A practical method for spectroscopic calculations of high dimensional molecular systems 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2018
Academic Article
Open Access
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Anharmonic vibrational eigenfunctions and infrared spectra from semiclassical molecular dynamics 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2018
Academic Article
Partially Open Access
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Herman-Kluk propagator is free from zero-point energy leakage 
CHEMICAL PHYSICS
ELSEVIER
2018
Academic Article
Partially Open Access
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Protonated glycine supramolecular systems: The need for quantum dynamics 
CHEMICAL SCIENCE
ROYAL SOCIETY OF CHEMISTRY
2018
Academic Article
Open Access
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Simplified approach to the mixed time-averaging semiclassical initial value representation for the calculation of dense vibrational spectra 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS (AIP)
2018
Academic Article
Open Access
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“Divide-and-conquer” semiclassical molecular dynamics : An application to water clusters 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2018
Academic Article
Open Access
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Application of the mixed time-averaging semiclassical initial value representation method to complex molecular spectra 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2017
Academic Article
Open Access
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On-the-Fly ab Initio Semiclassical Calculation of Glycine Vibrational Spectrum 
JOURNAL OF CHEMICAL THEORY AND COMPUTATION
AMERICAN CHEMICAL SOCIETY
2017
Academic Article
Open Access
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Semiclassical "divide-and-Conquer" Method for Spectroscopic Calculations of High Dimensional Molecular Systems 
PHYSICAL REVIEW LETTERS
AMERICAN PHYSICAL SOCIETY
2017
Academic Article
Open Access
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Mixed semiclassical initial value representation time-averaging propagator for spectroscopic calculations 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2016
Academic Article
Partially Open Access
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The importance of the pre-exponential factor in semiclassical molecular dynamics 
THE JOURNAL OF CHEMICAL PHYSICS
AMERICAN INSTITUTE OF PHYSICS
2016
Academic Article
Open Access
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Semiclassical Molecular Dynamics for Spectroscopic Calculations 
WILEY
2020
Chapter
Open Access
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